Skip to content
Skip to main content

Food, Diet & Nutrition – An Inclusive PubMed Search

[March, 2016 – With NLM’s recent introduction of an inclusive diet, food and nutrition explosion, in most cases we recommend using the new explosion instead of the hedge described below. Please see our article on the new explosion.]

By Eric Rumsey and Janna Lawrence

As discussed in a previous article, searching for Food, Diet, and Nutrition in PubMed is tricky because the relevant Medical Subject Headings (MeSH) for the subject are scattered widely in the classification scheme. To do a thorough search, therefore, it’s necessary to use a number of terms. To make this easier, we have created a search strategy, or hedge, that combines most of the Food-Diet-Nutrition terms in one search. The hedge search, of course, is much too large to be useful by itself (it gets over 1.5 million citations in PubMed). So it’s intended to be combined with another subject. A typical example would be finding the nutritional aspects of a disease. Here is the hedge:

food OR foods OR beverages OR diet OR dietary OR vitamin OR vitamins OR nutrition OR nutritional OR nutrition disorders OR food industry OR nutritional physiological phenomena OR dietary fats OR dietary proteins OR feeding behavior

To use this search, click this link. You can also copy the text above and paste it into the PubMed search box. If you have a personal “My NCBI” account in PubMed, the hedge search can be saved for later use, or it can be made into a search filter. For information on setting up and using saved searches, see here; for more information on filters, see here.

List of terms in the hedge (below). Terms on the list that have no accompanying text are searched only as text-words (words appearing in article titles or abstracts), and as words that are part of MeSH terms.Terms below that are found in MeSH (which are also automatically searched as text-words) have brief commentary.

Disclaimer: This hedge is not ALL-inclusive for Food-Diet-Nutrition. As complicated as the subject is, it’s not possible to include all of the relevant terms in one search. This is especially the case because most plant-based foods are not in any category that can be searched together. The Food explosion does include many specific foods, but most plant-based foods are only in the Plants explosion, and not in the Food explosion. For tips on searching for plant-based foods, see here.

UpToDate Mobile App now available!

UpToDateMobileUpToDate is one of the leading evidence-based clinical practice tools available, and has long been provided for University of Iowa students, faculty, and clinicians. Written by a recognized faculty of experts who each address a specific clinical issue, the contents synthesize the latest evidence and best practices.

Now, access to this resource has become even more convenient for mobile device users with the introduction of the UpToDate mobile app.

In order to access this resource, members of the University of Iowa Community can simply register for an account at http://www.uptodate.com using a valid @uiowa.edu email address. Users will receive a confirmation email, after which the app can be downloaded and initiated with full entrée into thousands of topic areas. Note that full-text of linked content isn’t directly available from within the app interface.

The app is available for iOS, Android, and Windows 8.

Please contact Hardin Library with any questions of comments!

Searching for Food, Diet & Nutrition in PubMed

This article has been superseded by the following:
Diet, Food, and Nutrition – How To Search in PubMed

**********************

By Eric Rumsey and Janna Lawrence

Much of the power of PubMed searching is due to the elegant Medical Subject Heading [MeSH] system used to index articles. When you type words into the PubMed search box, it looks for the most appropriate MeSH terms to use for your topic. When PubMed searches those MeSH terms, it also searches for closely related terms that are narrower in scope. This is especially useful because it makes it easy to search for broad categories of subjects. Search for cancer, for instance, and you’ll get every type of cancer, from leukemia to melanoma, whether the actual word cancer is used or not. The MeSH system works well for most all subjects in PubMed. A glaring exception, however, is food and nutrition. Unlike most other subjects, to do a comprehensive food and nutrition search, it’s necessary to search for at least four different concepts:

  • Food and Beverages (a MeSH term)
  • Nutritional Physiological Phenomena (a MeSH term, which includes Diet as a narrower term)
  • Diet Therapy (a subheading)
  • Nutrition (Unlike the concepts above, this is actually not a MeSH term; it includes searching for the word nutrition as a text word, and several MeSH terms that use the word nutrition or nutritional)

Unfortunately, the articles that are indexed with terms in these clusters often do not overlap. Many articles are in only one of the clusters. Making things even more complicated, there are some aspects of the subject that are not included in any of these broad concepts. This is especially the case when searching for specific food ingredients or nutritional supplements. Here are a some examples that illustrate this — these articles are not indexed with any of the general nutritional MeSH terms mentioned above:


Here are additional articles we’ve written on searching food, diet and nutrition in PubMed:

UI affiliates: For help with food and nutrition searching in PubMed, please contact librarians at Hardin.

Print DSM-5 Available at Hardin Library

A print copy of the DSM-5 is now available in the Hardin Permanent Reserve collection, under call number RC 455.2 .C4 D54 2013.  It may be checked out for two hours at a time.

We have had several questions about whether we will be adding the electronic version of the DSM-5.  The quick answer is yes, we will!  The longer answer is that we have to wait for it to actually be available.  We get the electronic version of the DSM through the American Psychiatric Association’s Psychiatry Online platform.  They have informed us that the DSM-5 will be added sometime this summer.

If you have questions about how we acquire new resources, please contact Janna Lawrence at janna-lawrence@uiowa.edu or 319-335-9870.

Problems with Logging into NCBI and Proxy

It has come to our attention that some people are unable to access their NCBI accounts from off-campus.  Occasionally, access from on-campus is also not working. With this problem, attempts to log into NCBI accounts result in the page failing to load completely. Sometimes, there is a notice at the bottom of the screen that you can click to allow the page to completely load, but that isn’t always the case.

It turns out there is a problem with the way that the library’s proxy server is interacting with the NCBI login page.  (The proxy server is what makes the links to full-text work.) The issue is being addressed, but in the meantime, if you want to use your NCBI account through the Hardin Library website, please use the following link: PubMed NCBI. You should use this link instead of the link at the top right of the PubMed website.

Picture of NCBI link in PubMed

Once you are logged into NCBI, you can access PubMed by using the link at the bottom of the page as shown in this image.

Picture of the PubMed Link from the NCBI page

If you continue to have problems accessing your NCBI account or have any other questions, please contact Hardin Library.