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Congratulations to our December 2016 Graduate | Seunggun Lee

Seunggun Lee
Seunggun Lee

Seunggun Lee has worked at the Hardin Library for 2 years and will be graduating this month with a B.S., Psychology with a Minor in Physical Activity and Nutrition Science.

What will you be doing after graduation?
I’ve got a job at Four Oaks in Cedar Rapids. I will be working there as a Youth Counselor from next year. I will help children who are diagnosed with mental issues by being a role in the day-to-day care of the children including the use of Trauma Informed Care. I am ultimately helping them heal their deeper trauma and grow successfully into adulthood.

Also, I will be working at the Psychology Research lab at the University of Iowa to gain more experience about collecting data and statistically analyzing it in the lab, which would help me choose which graduate program i would pursue in the future. (I am still deciding which lab I would like to work next year).
I am planning to go to graduate school in 2018 as well.

My favorite part about working at the Hardin Library
My favorite part about working at Hardin library is to offer service by greeting patrons at the front desk in the morning and help them find resources for them. Also, I have met a lot of good people who are emotionally helping me go through a harsh college life.

 

 

 

VPN Service Changing November 30 has been delayed | vpn.uiowa.edu

The VPN website changes that were scheduled for Wednesday, November 30, 2016 have been delayed until further notice so that our support team can address several support issues. Please contact ITS with feedback or questions.

***********delayed until further notice***************

On Wednesday, November 30, 2016 from 7 a.m. to 8 a.m. the university VPN service will be changed. If you use the VPN website (https://vpn.uiowa.edu/) as your VPN connection method, you need to download, install, and use the Cisco AnyConnect client instead because this site is being discontinued as a VPN connection method.

The website will be discontinued because:

1. The overall practice of a web VPNs is no longer an industry best practice.

2. Support for the web VPN functionality from the vendor is very limited as a result, and not being actively updated.

3. The web VPN service has been responsible for confusion as to which option to use to access campus resources.

Visit this site to find more information on how to download, install, and connect to the Cisco AnyConnect VPN client.

If you have any questions, please contact the ITS Help Desk:

ITS Help Desk

The University of Iowa

2800 University Capitol Centre

319-384-HELP (4357)

http://its.uiowa.edu/helpdesk

Open Access Week | Guest Post by Leonardo Marchini, DDS, MSD, PhD Preventative and Community Dentistry

openaccessweek_logoby Willow Fuchs

During Open Access week (October 24-30, 2016) we will be highlighting a number of guest posts from University of Iowa Faculty and Staff who have personal experience making their work Open Access. marchini_leo_051716_200x300_0

 Leonardo Marchini, DDS, MSD, PhD, Assistant Professor, Department of Preventative and Community Dentistry.

See his Iowa Research Online deposited publications here.

I consider open access publishing a better way to share research findings, since by removing the financial barrier to access it allows for a larger audience to read and use the findings worldwide. It also allows for authors to share their publications more widely, by promoting it in research oriented social media and e-mailing it to groups of researchers in the same field, allowing for even more exposure.

However, most journals in my research field are not open access. In a recent work with a broader focus, I searched for a journal capable of reaching a larger audience and then selected an open access Journal with a higher than average impact factor in my field. The submission process happened as usual, and the peer review was intense, but the manuscript was accepted after a couple review rounds.

However, the publication fees for this journal would be a problem if I was not supported by the UI Libraries Open Access Fund. My experience with the Open Access Fund was amazing! I applied and got funded really fast!

Since then the article has been published and received great attention from the scientific community in many countries, as we had a lot of comments and requests for additional information through channels that would not be available for non-open access articles, like researcher networks. I hope it will reflect in more citations in the near future.

Open Access Week | Chioma M. Okeoma, Ph.D., Microbiology

By Willow Fuchs

During the month of Open Access week (October 24-30, 2016) we will be highlighting a number of guest posts from University of Iowa Faculty and Staff who have personal experience making their work Open Access.  We appreciate their contributions.

The first guest post is by Chioma M. Okeoma, Ph.D, Assistant Professor of Microbiology.  okeoma

See her Iowa Research Online deposited publications here.

Open access (OA) literally means making literature available to researchers, teachers, journalists, policy makers, and the general public without barriers. Without the open access mechanism, readers or consumers of scientific findings would face price and permission barriers for the use of research findings.

For authors like me, OA provides unlimited access to our work to anyone regardless of their geographic location. The benefits are optimal dissemination of intellectual findings, rigorous peer and public discourse, and increased citations. Above all, OA provides an author maximum visibility and impact for research findings. As authors benefit from publishing OA, so do institutions.

Of course OA publishing is not without a cost to authors because OA publishers charge fees to cover costs. However, the cost of publishing may be covered by grants to authors, or by government and/or institutional subsidies depending on the country and institution. For example, the University of Iowa is a huge proponent of OA publishing. The University through the Office of the Provost and University Libraries provides funds to cover the fees for OA publishing; http://guides.lib.uiowa.edu/scholarly_publishing/OAfund. So when next you think of publishing, think OA. Try it and you will find being “OPEN” truly rewarding.

Chioma M. Okeoma, Ph.D

Learn more about NCBI Molecular Data, NCBI Blast and EDirect | Workshops

The University of Michigan’s Taubman Health Sciences Library is hosting a series of National Center for Biotechnology Information (NCBI) workshops in October 2016.  Dr. Peter Cooper and Dr. Wayne Matten, of NCBI will conduct the workshops that will be streamed and available in Room 401, Hardin Library for the Health Sciences.  No registration required.  Free and open to all.

Tuesday, 10/4, 8am-11am- Navigating NCBI Molecular Data Using the Integrated Entrez System and BLAST. This workshop provides an introduction to the NCBI molecular databases and how to access the data using the Entrez text-based search system and BLAST sequence similarity search tool. You will learn the varied types of available molecular data, and how to find and display sequence, variation, genome information using organism sources (Taxonomy), data sources (Bioproject) and emphasizing the central role of the gene as an organizing concept to navigate across the integrated databases (Gene, Nucleotide, Protein, dbSNP and other resources).

Wednesday, 10/5, 9 8am-11am- A Practical Guide to NCBI BLAST. This workshop highlights important features and demonstrates the practical aspects of using the NCBI BLAST service, the most popular sequence similarity service in the world. You will learn about useful but under-used features of the service. These include access from the Entrez sequence databases; the new genome BLAST service quick finder; the integration and expansion of Align-2- Sequences; organism limits and other filters; re-organized databases; formatting options and downloading options; and TreeView displays. You will also learn how to use other important sequence analysis services associated with BLAST including Primer BLAST, an oligonucleotide primer designer and specificity checker; the multiple protein sequence alignment tool, COBALT; and MOLE-BLAST, a new tool for clustering and providing taxonomic context for targeted loci sequences (16S, ITS, 28S). These aspects of BLAST provide easier access and results that are more comprehensive and easier to interpret.

Thursday, 10/6, 8am-11am- EDirect: Command Line Access to NCBI’s Biomolecular Databases. The EDirect suite of programs allows easy command line access for searching and retrieving literature (PubMed) and accessing NCBI’s biomolecular (Gene, Nucleotide, sequence databases, etc.) records. Its advantages include direct command-line access to NCBI’s databases without writing Perl or Python scripts, construction of custom pipelines for processing data, built-in batch access, and the ability to generate highly flexible custom output reports. During the optional first hour of this workshop (8-9 AM), you will get a basic introduction to the Unix/Linux command line interface. The main workshop (9am-11am) will cover how to use EDirect to set-up simple pipelines to retrieve and process data from PubMed, Gene, and the Nucleotide and Protein sequence databases. Access to EDirect installed in a Linux environment on a cloud service will be provided.

Individuals with disabilities are encouraged to attend all University of Iowa-sponsored events. If you are a person with a disability who requires a reasonable accommodation in order to participate in this program please call Janna Lawrence at 319-335-9871.